RE: [fluka-discuss]: Fwd: Cannot handle DICOM and blank information tab

From: Vasilis Vlachoudis <Vasilis.Vlachoudis_at_cern.ch>
Date: Fri, 30 Oct 2015 10:40:09 +0000

Hi Lars,

the message is misleading since the word "SliceLocation" was missing.
You have to introduce the SliceLocation in your dicom

Cheers
Vasilis

________________________________
From: owner-fluka-discuss_at_mi.infn.it [owner-fluka-discuss_at_mi.infn.it] on behalf of Lars Fredrik Fjæra [lfj049_at_student.uib.no]
Sent: 29 October 2015 12:27
To: fluka-discuss_at_fluka.org
Subject: [fluka-discuss]: Fwd: Cannot handle DICOM and blank information tab

Dear Fluka users

I've made a water phantom using a pydicom script which I'm trying to import into Fluka. The patient name in the dicom files are PHANTOM, WATER and I get the following error message:
"Error cannot handle DICOM without PHANTOM, WATER"

Aditionally, the information tab, for the batch of dicom files is completely blank. No info is shown. My dicom files should, as far as I can see, have all the necessary tags (UID, Patient Name etc.). I've attached the two first slices (of 100) of the dicom files. Importing the water phantom to a commercial TPS worked just fine.

Are my dicom files missing some essential information that are needed by Fluka, or am I missing something? The error message aren't of much help, since my dicom files all have the same patient name.

Info from one dicom file:
---------------------------------------------

0008, 0008) Image Type CS: ['ORIGINAL', 'SECONDARY', 'AXIAL']

(0008, 0012) Instance Creation Date DA: '20151027'

(0008, 0013) Instance Creation Time TM: '131837'

(0008, 0016) SOP Class UID UI: CT Image Storage

(0008, 0018) SOP Instance UID UI: 2.25.289420829634680003159099697264303545856.99

(0008, 0020) Study Date DA: '20151027'

(0008, 0021) Series Date DA: '20151027'

(0008, 0022) Acquisition Date DA: '20151027'

(0008, 0030) Study Time TM: '131837'

(0008, 0031) Series Time TM: '131837'

(0008, 0032) Acquisition Time TM: '131837'

(0008, 0050) Accession Number SH: ''

(0008, 0060) Modality CS: 'CT'

(0008, 0070) Manufacturer LO: 'pydicom'

(0008, 0090) Referring Physician's Name PN: ''

(0008, 1090) Manufacturer's Model Name LO: 'https://github.com/raysearchlabs/dicomutils'

(0008, 2111) Derivation Description ST: 'Generated from numpy'

(0010, 0010) Patient's Name PN: 'PHANTOM^WATER^^'

(0010, 0020) Patient ID LO: '123456789'

(0010, 0030) Patient's Birth Date DA: ''

(0010, 0040) Patient's Sex CS: 'O'

(0018, 0050) Slice Thickness DS: '2.5'

(0018, 0060) KVP DS: ''

(0018, 1020) Software Version(s) LO: 'PyDICOM 0.9.7'

(0018, 5100) Patient Position CS: 'HFS'

(0020, 000d) Study Instance UID UI: 2.25.289425877260913786940047781949379452416

(0020, 000e) Series Instance UID UI: 2.25.289428318280600851424289039038489304576

(0020, 0010) Study ID SH: ''

(0020, 0011) Series Number IS: ''

(0020, 0012) Acquisition Number IS: ''

(0020, 0013) Instance Number IS: ''

(0020, 0032) Image Position (Patient) DS: ['-123.75', '-123.75', '123.75']

(0020, 0037) Image Orientation (Patient) DS: ['1', '0', '0', '0', '1', '0']

(0020, 0052) Frame of Reference UID UI: 2.25.289423568552258121277250306078666661376

(0020, 1002) Images in Acquisition IS: '1'

(0020, 1040) Position Reference Indicator LO: ''

(0028, 0002) Samples per Pixel US: 1

(0028, 0004) Photometric Interpretation CS: 'MONOCHROME2'

(0028, 0010) Rows US: 100

(0028, 0011) Columns US: 100

(0028, 0030) Pixel Spacing DS: ['2.5', '2.5']

(0028, 0100) Bits Allocated US: 16

(0028, 0101) Bits Stored US: 16

(0028, 0102) High Bit US: 15

(0028, 0103) Pixel Representation US: 0

(0028, 1052) Rescale Intercept DS: '-1024'

(0028, 1053) Rescale Slope DS: '1'

(7fe0, 0010) Pixel Data OB or OW: Array of 20000 bytes

-------------------------------------

Best regards,
---
Lars Fredrik Fjæra
__________________________________________________________________________
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Received on Fri Oct 30 2015 - 13:23:16 CET

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