Re: [fluka-discuss]: Problem building Fluka2011.2c.6

From: Mina Nozar <nozarm_at_triumf.ca>
Date: Tue, 13 Jun 2017 13:11:25 -0700

Hello Francesco,

See below for details.
Best wishes,
Mina


_Local cluster system info:_

nozarm_at_fluka01:~: more /etc/redhat-release
gives me:
Scientific Linux release 6.9 (Carbon)

nozarm_at_fluka01:~: more /proc/version
gives me:
Linux version 2.6.32-696.el6.x86_64 (mockbuild_at_sl6.fnal.gov) (gcc
version 4.4.7 20120313 (Red Hat 4.4.7-18) (GCC) ) #1 SMP Tue Mar 21
16:21:25 CDT 2017

_FLUKA2011.2c.6 build:_

nozarm_at_fluka01:/triumfcs/linux/fluka/fluka: ls -alrt
lrwxrwxrwx 1 nozarm fluadm 9 Jun 7 14:46 default -> 2011.2c.6

nozarm_at_fluka01:/triumfcs/linux/fluka/fluka/2011.2c.6: ls -alrt
-rw-rwxr-x 1 nozarm fluadm 3414069 Mar 18 1998 e6r1nds3.fyi
-rw-rwxr-x 1 nozarm fluadm 1865835 Mar 18 1998 jef2.fyi
-rw-rwxr-x 1 nozarm fluadm 1473066 Mar 18 1998 jendl3.fyi
-rw-rwxr-x 1 nozarm fluadm 619268 Oct 14 2000 elasct.bin
-rw-rwxr-x 1 nozarm fluadm 211136 Feb 24 2005 xnloan.dat
-rw-rwxr-x 1 nozarm fluadm 3498648 Mar 3 2005 gxsect.bin
-rw-rwxr-x 1 nozarm fluadm 66232 Mar 8 2005 fluodt.dat
-rw-rwxr-x 1 nozarm fluadm 1651 Jul 15 2005 random.dat
-rw-rwxr-x 1 nozarm fluadm 1125320 Jul 26 2005 cohff.bin
-rw-rwxr-x 1 nozarm fluadm 330008 Aug 27 2005 sigmapi.bin
-rw-rwxr-x 1 nozarm fluadm 3198853 Oct 28 2005 CERN-2005-10.pdf
-rw-rwxr-x 1 nozarm fluadm 3291 Mar 21 2006 exfixed.inp
-rw-rwxr-x 1 nozarm fluadm 3270 Mar 21 2006 example.inp
-rw-rwxr-x 1 nozarm fluadm 3867 Mar 24 2006 12ctst.inp
-rw-rwxr-x 1 nozarm fluadm 110394 Oct 24 2006 grv98nlm.grid
-rw-rwxr-x 1 nozarm fluadm 43663 Oct 24 2006 grv98nlf.grid
-rw-rwxr-x 1 nozarm fluadm 110394 Oct 24 2006 grv98nld.grid
-rw-rwxr-x 1 nozarm fluadm 110393 Oct 24 2006 grv98lo.grid
-rw-rwxr-x 1 nozarm fluadm 43662 Oct 24 2006 grv98lof.grid
-rw-rwxr-x 1 nozarm fluadm 3815 Jul 25 2007 12cqmd.inp
-rw-rwxr-x 1 nozarm fluadm 3270 Oct 17 2007 exmixed.inp
-rw-rwxr-x 1 nozarm fluadm 1257 Nov 5 2007 sidae.dat
-rw-rwxr-x 1 nozarm fluadm 2724 Nov 5 2007 sidapi.dat
-rw-rwxr-x 1 nozarm fluadm 1067 Nov 5 2007 sidap.dat
-rw-rwxr-x 1 nozarm fluadm 137999 Nov 5 2007 sidan.dat
-rw-rwxr-x 1 nozarm fluadm 216778 Sep 14 2008 nunstab.data
-rw-rwxr-x 1 nozarm fluadm 1907312 Jan 30 2011 brems_fin.bin
-rw-rwxr-x 1 nozarm fluadm 796 Mar 24 2011 makeflags
-rw-rwxr-x 1 nozarm fluadm 11334 Nov 11 2011 README
-rw-rwxr-x 1 nozarm fluadm 43199189 May 3 2013 nuclear.bin
-rw-rwxr-x 1 nozarm fluadm 8589 Oct 15 2014 LICENSE.fluka2011.2c
-rw-rwxr-x 1 nozarm fluadm 42055 Oct 19 2014
RELEASE-NOTES.fluka2011.2c
-rw-rwxr-x 1 nozarm fluadm 388 Nov 25 2014 makefile
-rw-rwxr-x 1 nozarm fluadm 2285561 Apr 12 2016 FM.pdf
-rw-rwxr-x 1 nozarm fluadm 262846774 Oct 4 2016 neuxsc-ind_260.bin
-rw-rwxr-x 1 nozarm fluadm 1246582 Jun 5 03:17 fluka2011.manual
drwxrwsr-x 2 nozarm fluadm 264 Jun 5 04:41 flukapro
-rw-rwxr-x 1 nozarm fluadm 48590642 Jun 5 04:46 libflukahp.a
-rw-rwxr-x 1 nozarm fluadm 120572 Jun 5 04:47 libdpmmvax.a
-rw-rwxr-x 1 nozarm fluadm 96106 Jun 5 04:47 librqmdmvax.a
-rw-rwxr-x 1 nozarm fluadm 114 Jun 5 07:21 Version.tag
drwxrwsr-x 2 nozarm fluadm 110 Jun 7 14:41 Fad
drwxrwsr-x 2 nozarm fluadm 326 Jun 7 14:41 DDS
drwxrwsr-x 2 nozarm fluadm 40 Jun 7 14:41 usermvax
drwxrwsr-x 2 nozarm fluadm 4 Jun 7 14:41 dpmjet
drwxrwsr-x 2 nozarm fluadm 3 Jun 7 14:41 latestRQMD
drwxrwsr-x 2 nozarm fluadm 4 Jun 7 14:41 interface
drwxrwsr-x 3 nozarm fluadm 65 Jun 7 14:41 gcrtools
drwxrwsr-x 2 nozarm fluadm 2 Jun 7 14:42 mkdir
-rwxrwxr-x 1 nozarm fluadm 33199790 Jun 7 14:43 flukahp
drwxrwsr-x 12 nozarm fluadm 53 Jun 7 14:43 .
drwxrwsr-x 2 nozarm fluadm 66 Jun 7 14:44 flutil



On 2017-06-08 01:21 PM, Francesco Cerutti wrote:
>
> Hi Mina
>
> I'm a bit puzzled by your findings.
> I've just tried to install the latest
> fluka2011.2c-linux-gfor64bitAA.tar.gz (2011.2c.6 respin of June 5th 2017)
> exactly on Scientific Linux release 6.9 (Carbon) gcc/gfortran version
> 4.4.7 (as on your local cluster 2) and, as expected, it failed (and
> the direct lfluka command could not help).
>
> Are you sure that everything went OK on your side with the declared
> ingredients? By the way, as the website warning >= 4.5 was (is)
> claiming, even the dedicated package previously provided for gfortran
> 5 did not work for gfortran 4.4
>
> Best wishes
> Francesco
>
> **************************************************
> Francesco Cerutti
> CERN-EN/STI
> CH-1211 Geneva 23
> Switzerland
> tel. ++41 22 7678962
> fax ++41 22 7668854
>
> On Thu, 8 Jun 2017, Mina Nozar wrote:
>
>>
>> Hello Paola,
>>
>> Thank you. Can this information please be clearly stated on the
>> download
>> website?
>>
>> - The website is still saying: requires version >= 4.5.
>> - Error message (that only appears on certain systems, says 'gfortran
>> >= 4.8
>> is required for running FLUKA!!'
>> - Looks like gcc version 7 does not work for some (from forum messages)
>> - And from Francesco, we are hearing: 'presently need * gfortran
>> version 6'
>>
>> These are different statements.
>>
>> I have been able to compile 'Fluka2011.2c.6'. with gcc version 5.4.0,
>> 4.4.7, and 4.7.3. But compiling and running are different issues. If
>> 'Fluka2011.2c.6' is supposed to be compiled and run with a specific
>> version
>> of gcc, it should be clearly stated.
>>
>> This is important as I was able to get around installing Fluka on three
>> separate systems last night (prior to receiving this message). I usually
>> install the latest Fluka versions in the following order: 1) my
>> laptop, 2)
>> local cluster, 3) remote cluster
>>
>> 1) my laptop:
>> Ubuntu 16.04.2 LTS
>> Release: 16.04
>> gcc version 5.4.0
>> The installation went smoothly, without any error messages.
>>
>> 2) local cluster:
>> Scientific Linux release 6.9 (Carbon)
>> gcc version 4.4.7
>>
>> 3) remote cluster (s)
>> Various head nodes with different flavours of Linux install but local
>> installation of gcc is used to compile Fluka.
>> gcc version 4.7.3
>>
>> Of the above, I only ran into the installation issue with 'gfortran
>> >= 4.8
>> is required for running FLUKA!!' on case 3). And I was able to get
>> around
>> this by simply building 'flukahp' by hand, i.e. from inside flutil:
>> ./lfluka -o flukahp -m fluka
>>
>>
>> Thank you,
>> Mina
>>
>>
>> On 2017-06-08 03:19 AM, paola sala wrote:
>> Hello Mina
>> You are right, the website needs to be updated.
>> gfortran<4.8 has been found to mis-compile the code, that's why
>> it is no longer accepted.
>> The distributed version has been compiled with gfortran 6.3.1,
>> new linux distributions already ship gfortran 7.0,
>> ... update if you can!
>>
>> Regards
>> Paola
>>
>> On 06/08/2017 01:21 AM, Mina Nozar wrote:
>>
>> I have not been able to build Fluka2011.2c.6 either with
>> gcc version 4.7.3
>>
>> Since when gfortran >= 4.8 is required to build/run
>> fluka? Website says: version >= 4.5 is sufficient.
>>
>>
>> GNU/Linux (x86_64)
>> beta version, requires gcc/gfortran (version >= 4.5)
>>
>> Thank you,
>>
>> Mina
>>
>>
>> [trsim_at_litai05:~/install]$ mv
>> fluka2011.2c.6-linux-gfor64bitAA.tar.gz
>> fluka2011.2c-6-linux-gfor64bitAA.tar.gz
>> [trsim_at_litai05:~/install]$ ~/scripts/installFluka.py -l
>> fluka2011.2c-6-linux-gfor64bitAA.tar.gz fluka2011.2c-6
>> Prepping install directory
>> /home/trsim/install/fluka2011.2c-6...
>> Untarring FLUKA source...
>> Building FLUKA to /home/trsim/install/fluka2011.2c-6...
>> FLUPRO=/g01/home/trsim/install/fluka2011.2c-6
>> flutil/lfluka -o flukahp -m fluka
>> $FLUPRO = /g01/home/trsim/install/fluka2011.2c-6
>> gfortran >= 4.8 is required for running FLUKA!!
>> cd flutil; FLUPRO=/g01/home/trsim/install/fluka2011.2c-6
>> make all; cd ..
>> make[1]: Entering directory
>> `/g01/home/trsim/install/fluka2011.2c-6/flutil'
>> /g01/home/trsim/install/fluka2011.2c-6/flutil/fff -N
>> actdline.f
>> gfortran >= 4.8 is required for running FLUKA!!
>> /g01/home/trsim/install/fluka2011.2c-6/flutil/fff -N
>> hpadd.f
>> gfortran >= 4.8 is required for running FLUKA!!
>> /g01/home/trsim/install/fluka2011.2c-6/flutil/fff -N hpc.f
>> gfortran >= 4.8 is required for running FLUKA!!
>> /g01/home/trsim/install/fluka2011.2c-6/flutil/fff -N
>> hpfor.f
>> gfortran >= 4.8 is required for running FLUKA!!
>> gfortran -o actdline actdline.o
>> gfortran: error: actdline.o: No such file or directory
>> make[1]: *** [actdline] Error 1
>> make[1]: Leaving directory
>> `/g01/home/trsim/install/fluka2011.2c-6/flutil'
>> Copying FLUKA build to
>> /home/trsim/build/fluka/fluka2011.2c-6...
>> Setting permissions...
>> Setting default FLUKA build to
>> /home/trsim/build/fluka/fluka2011.2c-6...
>>
>>
>>
>>
>> On 2017-06-07 07:06 AM, Hans Beijers wrote:
>>
>> Dear Fluka experts,
>>
>> Unfortunately there is a problem building the latest Fluka2011.2c.6
>> version,
>> the error meassage is this:
>>
>> /usr/bin/ld: /home/<username>/Apps/fluka/libflukahp.a(flukam.o):
>> unrecognized relocation (0x2a) in section `.text'
>> /usr/bin/ld: final link failed: Bad value
>> collect2: error: ld returned 1 exit status
>>
>> It looks as if my linux version (Ubuntu 14) has a problem with the
>> binutils package, but I have not found a newer package that works
>> with Ubuntu 14. Oth
>> er relevant information is given below:
>> Ubuntu 14.04
>> kernel: 4.4.0-78-generic
>> libstdc++6: 6.2.0-3ubuntu11~14.04
>> gfortran: 6.2.0-3ubuntu11~14.04
>>
>> Any help is greatly appreciated, thanks a lot.
>>
>> All the best,
>>
>> Hans
>>
>>
>>
>>
>>
>>



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Received on Tue Jun 13 2017 - 23:25:16 CEST

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