Re: How to combine data of different FLUKA runs

=09 <200904071923.n37JNg5J024581_at_smtp1.mi.infn.it>
=09 <1239975668.17275.71.camel_at_rvext.aria>
=09 <Pine.LNX.4.58.0904191342160.17652_at_lxplus219.cern.ch>
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Hi Stefan

Thanks for your hints.
Yes, I did check these files. The problem is, that fort.11, fort.12,
fort.15 and fort.2 are dead links:

~/flukawork/test/fluka_10140 $ ls -lh
total 0
lrwxrwxrwx 1 rhaelg rhaelg 27 Apr 22 18:08 elasct.bin
-> /usr/local/fluka/elasct.bin
lrwxrwxrwx 1 rhaelg rhaelg 27 Apr 22 18:08 fluodt.dat
-> /usr/local/fluka/fluodt.dat
lrwxrwxrwx 1 rhaelg rhaelg 45 Apr 22 18:08 fort.1
-> /home/rhaelg/flukawork/test/ranneutron_rw3001
lrwxrwxrwx 1 rhaelg rhaelg 18 Apr 22 18:08 fort.11 -> neutron_rw3001.out
lrwxrwxrwx 1 rhaelg rhaelg 44 Apr 22 18:08 fort.12
-> /usr/local/fluka/libec_thihecufealw_10t.pemf
lrwxrwxrwx 1 rhaelg rhaelg 18 Apr 22 18:08 fort.15 -> neutron_rw3001.err
lrwxrwxrwx 1 rhaelg rhaelg 17 Apr 22 18:08 fort.2 -> ranneutron_rw3002
lrwxrwxrwx 1 rhaelg rhaelg 35 Apr 22 18:08 neuxsc.bin
-> /usr/local/fluka/neuxsc-ind_260.bin
lrwxrwxrwx 1 rhaelg rhaelg 28 Apr 22 18:08 nuclear.bin
-> /usr/local/fluka/nuclear.bin
lrwxrwxrwx 1 rhaelg rhaelg 28 Apr 22 18:08 sigmapi.bin
-> /usr/local/fluka/sigmapi.bin
lrwxrwxrwx 1 rhaelg rhaelg 27 Apr 22 18:08 xnloan.dat
-> /usr/local/fluka/xnloan.dat

nohup.out has the following content when just running the run in the
subfolder:

$TARGET_MACHINE =3D Linux
$FLUPRO =3D /usr/local/fluka
$PEMF =3D /usr/local/fluka/libec_thihecufealw_10t.pemf

Initial seed copied from /usr/local/fluka
Running fluka in /home/rhaelg/flukawork/test/fluka_10140cp: cannot stat
`run1/neutron_rw3.inp': No such file or directory

=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D Runni=
ng FLUKA for cycle # 1
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D
/usr/local/fluka/flutil/rfluka: line 280: neutron_rw3.inp: No such file
or directory

But the stated file exists:

~/flukawork/test $ ls -lh run1/
total 8.0K
-rw-r--r-- 1 rhaelg rhaelg 7.4K Apr 22 18:08 neutron_rw3.inp

I guess it is a problem with the paths. Any further suggestions?

Greetz

Roger

On Sun, 2009-04-19 at 13:45 +0200, Stefan Roesler wrote:
> Hi Roger,
>=20
> Did you check the content of fort.11 (the standard FLUKA output file) and=
=20
> fort.15 (the error file)? Also see nohup.out which should have been=20
> created in ~/flukawork/test and which contains the printouts from rfluka.=
=20
> In case of doubt please send me those files.
>=20
> Cheers
> Stefan
>=20
>=20
> On Fri, 17 Apr 2009, Roger H=C3=A4lg wrote:
>=20
> > Hi Vasilis
> >=20
> > Thank you for your answer. Your second way works fine. But I was not
> > able to get your first suggestion to work.=20
> >=20
> > I can duplicate my standard run in the Run Fluka tab. I save the input
> > file in an already created subfolder of the standard run. I enter a
> > Number for the random seed and select the executable.=20
> > When I start the run by clicking Run, flair tries to attach to the run.
> > After a few minutes the Status changes to Finished OK, without starting
> > to calculate anything. The standard run in the main directory finishes
> > successfully. So I guess it is not because of the input file.=20
> >=20
> > I tried to copy some eventually needed files to the subdirectory,
> > without any success.
> >=20
> > I see the following commands in the flair output:
> >=20
> > Cmd: /usr/bin/nohup /usr/local/fluka/flutil/rfluka -e myfluka -M 3 neut=
ron_rw3=20
> > /usr/bin/nohup: ignoring input and appending output to `nohup.out'
> > =20
> > Cmd: /usr/bin/nohup /usr/local/fluka/flutil/rfluka -e myfluka -M 3 run1=
/neutron_rw3=20
> > /usr/bin/nohup: ignoring input and appending output to `nohup.out'
> >=20
> > A temporary directory is created for the run in the subfolder and it is=
n't deleted after finishing the run. It contains the following files:
> >=20
> > ~/flukawork/test $ ls fluka_17313
> > elasct.bin fort.1 fort.12 fort.2 nuclear.bin xnloan.dat
> > fluodt.dat fort.11 fort.15 neuxsc.bin sigmapi.bin
> >=20
> > The manually created subdirectory only contains the input file.=20
> >=20
> > Any suggestions what I am doing wrong?
> >=20
> > Best Regards
> >=20
> > Roger
> >=20
> > On Tue, 2009-04-07 at 18:10 +0200, Vasilis Vlachoudis wrote:
> > > Hi Roger,
> > >=20
> > > there are two ways in flair.
> > >=20
> > > 1. Create the runs in sub-folders. From version 0.7.6 you have this=
=20
> > > possibility
> > > and then in the Data Process frame you mark the "Recursive"=20
> > > checkbox. Then it will
> > > scan all sub-folders for the same pattern.
> > > =20
> > > 2. In the Data frame select the master run and select also the detect=
or(s).
> > > You click the "fitler" button right to the file display.
> > > Flair will popup a dialog to enter the pattern to search. It may l=
ook=20
> > > a bit confusing in the begging but the most important rules are writt=
en=20
> > > in the syntax text box.
> > > Lets say that the auxiliary runs you created them by adding a=20
> > > numerical suffix 2,3,... then modify the rule to
> > > +^\I\d\d\d\d_fort.\U$
> > > The first +/- is to include or remove a file,
> > > ^ means that the pattern should match the beginning of the string
> > > \I is substituted by flair with the filename of the input file (witho=
ut=20
> > > the .inp)
> > > \d is any digit from 0-9 (I've added an extra one from the default th=
ree=20
> > > digits corresponding to the cycle added by fluka)
> > > \U is the unit number
> > > $ means the pattern should match also the end of the string
> > >=20
> > > click ok and process
> > >=20
> > > WARNING you can have different patterns for each Usrxx detector. But =
if=20
> > > you select several then only from the pattern of the first selected=
=20
> > > detector will appear.
> > >=20
> > > Best Regards
> > > Vasilis
> >=20
> >=20
> >=20
> >=20
>=20
Received on Thu Apr 23 2009 - 22:44:09 CEST