RE: [fluka-discuss]: Problems with running FLUKA on Virtual Box and Flupix

From: Adam Dabkowski <DabkowskiA_at_cardiff.ac.uk>
Date: Mon, 15 Apr 2019 10:19:57 +0000

I did that all already. It works but during Fluka installation I got many messages about files which names were truncated and might cause problems.

I can run Flair but got the message about like this one and TIMEOUT:



[cid:image001.png_at_01D4F37D.29CADFD0]





Kind Regards



--

    Adam Dabkowski MSc



Cyclotron Engineer

Wales Positron Emission Tomography Imaging Centre (PETIC)



Cardiff University School of Medicine

College of Biomedical and Life Science

Heath Park

Cardiff

CF14 4XN



Tel: +44 02920 745787 / 07511 196842

Email: dabkowskia_at_cardiff.ac.uk

Peiriannydd Cyclotron

Canolfan Delweddu Tomograffeg Gollwng Positronau Cymru



Ysgol Meddygaeth Prifysgol Caerdydd Coleg y Gwyddorau Biofeddygol a Bywyd

Parc y Mynydd Bychan

Caerdydd

CF14 4XN



Tel: +44 02920 745787 / 07511 196842

E-bost: dabkowskia_at_caerdydd.ac.uk





-----Original Message-----
From: Andrea Fontana <andrea.fontana_at_pv.infn.it>
Sent: 15 April 2019 11:15
To: Adam Dabkowski <DabkowskiA_at_cardiff.ac.uk>
Cc: fluka-discuss_at_fluka.org
Subject: Re: [fluka-discuss]: Problems with running FLUKA on Virtual Box and Flupix



OK, in both cases your are using the Docker Toolbox which is based on Virtualbox and has some limitations with respect to the full Docker CE version.



Please make sure of the following:



- the working directory has to be C:\Users\docker and cannot be chosen

  differently;



- start a Docker Quickstart terminal as Administrator (to correctly

  initialize Docker); you can close this windows after the first start;



- work from a Windows prompt terminal started as Administrator;



With this steps done, could you try to execute again the install_win.bat and the run_win10_home.bat scripts and let me know if anything changes?



Kind regards,

Andrea





On 15/04/2019 12:04, Adam Dabkowski wrote:

> Windows 10 Home but it also appears on 7 Enterprisse.

>

>

> Kind Regards

>

> --

> Adam Dabkowski MSc

>

> Cyclotron Engineer

> Wales Positron Emission Tomography Imaging Centre (PETIC)

>

> Cardiff University School of Medicine

> College of Biomedical and Life Science Heath Park Cardiff

> CF14 4XN

>

> Tel: +44 02920 745787 / 07511 196842

> Email: dabkowskia_at_cardiff.ac.uk<mailto:dabkowskia_at_cardiff.ac.uk>

> Peiriannydd Cyclotron

> Canolfan Delweddu Tomograffeg Gollwng Positronau Cymru

>

> Ysgol Meddygaeth Prifysgol Caerdydd Coleg y Gwyddorau Biofeddygol a

> Bywyd Parc y Mynydd Bychan Caerdydd

> CF14 4XN

>

> Tel: +44 02920 745787 / 07511 196842

> E-bost: dabkowskia_at_caerdydd.ac.uk<mailto:dabkowskia_at_caerdydd.ac.uk>

>

>

> -----Original Message-----

> From: Andrea Fontana <andrea.fontana_at_pv.infn.it<mailto:andrea.fontana_at_pv.infn.it>>

> Sent: 15 April 2019 11:02

> To: Adam Dabkowski <DabkowskiA_at_cardiff.ac.uk<mailto:DabkowskiA_at_cardiff.ac.uk>>

> Cc: Andrea Fontana <andrea.fontana_at_pv.infn.it<mailto:andrea.fontana_at_pv.infn.it>>;

> fluka-discuss_at_fluka.org<mailto:fluka-discuss_at_fluka.org>

> Subject: RE: [fluka-discuss]: Problems with running FLUKA on Virtual

> Box and Flupix

> Importance: High

>

> Hello Adam,

> the error seems to be related to how symbolic links are treated by Windows: which version do you have, Windows 7 or 10? Home or professional edition?

>

> Andrea

>

>

>

>

>> Dear Andrea,

>>

>>

>>

>> Thank you for your last answer.

>>

>> I installed Docker and Fluka but I got such message trying to run any

>> input or flair file:

>>

>>

>>

>> [cid:image001.png_at_01D4F379.C8AB5110]

>>

>> I think it might be related to some file that were maybe lost durring

>> installation or windows is blocking access to them.

>>

>> Could you please advice?

>>

>>

>>

>>

>>

>> Kind Regards

>>

>>

>>

>> --

>>

>> Adam Dabkowski MSc

>>

>>

>>

>> Cyclotron Engineer

>>

>> Wales Positron Emission Tomography Imaging Centre (PETIC)

>>

>>

>>

>> Cardiff University School of Medicine

>>

>> College of Biomedical and Life Science

>>

>> Heath Park

>>

>> Cardiff

>>

>> CF14 4XN

>>

>>

>>

>> Tel: +44 02920 745787 / 07511 196842

>>

>> Email: dabkowskia_at_cardiff.ac.uk<mailto:dabkowskia_at_cardiff.ac.uk>

>>

>> Peiriannydd Cyclotron

>>

>> Canolfan Delweddu Tomograffeg Gollwng Positronau Cymru

>>

>>

>>

>> Ysgol Meddygaeth Prifysgol Caerdydd Coleg y Gwyddorau Biofeddygol a

>> Bywyd

>>

>> Parc y Mynydd Bychan

>>

>> Caerdydd

>>

>> CF14 4XN

>>

>>

>>

>> Tel: +44 02920 745787 / 07511 196842

>>

>> E-bost: dabkowskia_at_caerdydd.ac.uk<mailto:dabkowskia_at_caerdydd.ac.uk>

>>

>>

>>

>>

>>

>> -----Original Message-----

>> From: Andrea Fontana <andrea.fontana_at_pv.infn.it<mailto:andrea.fontana_at_pv.infn.it>>

>> Sent: 05 February 2019 12:45

>> To: Adam Dabkowski <DabkowskiA_at_cardiff.ac.uk<mailto:DabkowskiA_at_cardiff.ac.uk>>;

>> fluka-discuss_at_fluka.org<mailto:fluka-discuss_at_fluka.org>

>> Subject: Re: [fluka-discuss]: Problems with running FLUKA on Virtual

>> Box and Flupix

>>

>>

>>

>> Dear Adam,

>>

>> since the last year we have switched to Docker for running Fluka

>> in a Windows environment: this has advantages with respect to the use

>> of a virtual machine.

>>

>>

>>

>> You can find more information and the instructions on how to proceed

>> at the following link:

>>

>>

>>

>> https://eur03.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgit

>> h

>> ub.com%2Fflukadocker%2FF4D&amp;data=01%7C01%7CDabkowskiA%40cardiff.ac.

>> uk%7C50837290cc6a415e713008d6c1897697%7Cbdb74b3095684856bdbf06759778f

>> c

>> bc%7C1&amp;sdata=LzdJ5bYQqVe6hp3QZrg%2Bu4DcS51ohUZPZi0xx%2F9i0EI%3D&a

>> m

>> p;reserved=0

>>

>>

>>

>> Please, give it a try and let us know in case on troubles.

>>

>>

>>

>> Kind regards,

>>

>> Andrea

>>

>>

>>

>> On 05/02/2019 12:10, Adam Dabkowski wrote:

>>

>>> Dear Fluka Experts,

>>> I was running for year my simple experiments simulations with

>>> irradiation of stacked foils in cyclotron targets.

>>> However, since more than a year I receive strange errors and time

>>> out messages. I use Virtual Box and Flupix.

>>> Could you please verify my inp file but I think there are no errors

>>> as it was running well before.

>>> Kind Regards

>>> --

>>> /Adam Dabkowski MSc/

>>> *Cyclotron Engineer*

>>> Wales Positron Emission Tomography Imaging Centre (PETIC)* *Cardiff

>>> University School of Medicine College of Biomedical and Life Science

>>> Heath Park Cardiff

>>> CF14 4XN

>>> Tel: +44 02920 745787 / 07511 196842

>>> Email: dabkowskia_at_cardiff.ac.uk<mailto:dabkowskia_at_cardiff.ac.uk<mailto:dabkowskia_at_cardiff.ac.uk%3cmailto:dabkowskia_at_cardiff.ac.uk>>

>>> <mailto:dabkowskia_at_cardiff.ac.uk>

>>> *Peiriannydd Cyclotron*

>>> Canolfan Delweddu Tomograffeg Gollwng Positronau Cymru*

>>> **

>>> *Ysgol Meddygaeth Prifysgol Caerdydd Coleg y Gwyddorau Biofeddygol a

>>> Bywyd Parc y Mynydd Bychan Caerdydd

>>> CF14 4XN

>>> Tel: +44 02920 745787 / 07511 196842

>>> E-bost: dabkowskia_at_caerdydd.ac.uk<mailto:dabkowskia_at_caerdydd.ac.uk<mailto:dabkowskia_at_caerdydd.ac.uk%3cmailto:dabkowskia_at_caerdydd.ac.uk>>

>>> <mailto:dabkowskia_at_caerdydd.ac.uk>

>>

>>

>> --

>>

>> =====================================================================

>> =

>> ==

>>

>> Dr. Andrea Fontana tel: +39 0382 987991

>>

>> Istituto Nazionale fax: +39 0382 423241

>>

>> di Fisica Nucleare

>>

>> Sezione di Pavia e-mail:

>> andrea.fontana_at_pv.infn.it<mailto:andrea.fontana_at_pv.infn.it<mailto:andrea.fontana_at_pv.infn.it%3cmailto:andrea.fontana_at_pv.infn.it>>

>>

>> Via Bassi 6 web :

>> https://eur03.safelinks.protection.outlook.com/?url=www.pv.infn.it%2F

>> ~

>> fontana&amp;data=01%7C01%7CDabkowskiA%40cardiff.ac.uk%7C50837290cc6a4

>> 1

>> 5e713008d6c1897697%7Cbdb74b3095684856bdbf06759778fcbc%7C1&amp;sdata=5

>> V

>> YCmbnqt0LpvJhpG922ddPAB6Xd3jsY%2FpT824t%2FvmU%3D&amp;reserved=0

>>

>> 27100 PAVIA, Italy

>>

>> =====================================================================

>> =

>> ==

>>

>>

>>

>

> --

> ========================================================================

> Dr. Andrea Fontana tel: +39 0382 987991

> Istituto Nazionale fax: +39 0382 423241

> di Fisica Nucleare

> Sezione di Pavia e-mail: andrea.fontana_at_pv.infn.it<mailto:andrea.fontana_at_pv.infn.it>

> Via Bassi 6 web : https://eur03.safelinks.protection.outlook.com/?url=www.pv.infn.it%2F~fontana&amp;data=01%7C01%7CDabkowskiA%40cardiff.ac.uk%7C4a43b32cc1954e6951e608d6c18b466e%7Cbdb74b3095684856bdbf06759778fcbc%7C1&amp;sdata=PQ%2B3dtwldvkkLVycWaIW4S6SgnJvvVp%2F%2FM4%2Bfn4bVVU%3D&amp;reserved=0

> 27100 PAVIA, Italy

> ======================================================================

> ==

>

>

>



--

========================================================================

Dr. Andrea Fontana tel: +39 0382 987991

Istituto Nazionale fax: +39 0382 423241

di Fisica Nucleare

Sezione di Pavia e-mail: andrea.fontana_at_pv.infn.it<mailto:andrea.fontana_at_pv.infn.it>

Via Bassi 6 web : https://eur03.safelinks.protection.outlook.com/?url=www.pv.infn.it%2F~fontana&amp;data=01%7C01%7CDabkowskiA%40cardiff.ac.uk%7C4a43b32cc1954e6951e608d6c18b466e%7Cbdb74b3095684856bdbf06759778fcbc%7C1&amp;sdata=PQ%2B3dtwldvkkLVycWaIW4S6SgnJvvVp%2F%2FM4%2Bfn4bVVU%3D&amp;reserved=0

27100 PAVIA, Italy

========================================================================





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Received on Mon Apr 15 2019 - 13:50:46 CEST

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